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Table 42-31 ofd DOC6500 states that the minimum output frequency of the PLL is 60 MHz. The existing qmod code violated this by configuring the PLL multiplier output to 12*4 = 48 MHz. Let's use 12*8 = 96 and then divide that by two to get to the desired 48 MHz. This might help to resolve the non-working USB on the qmod so far.